6CZS
Crystal structure of human pro-cathepsin H C26S mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 98.242, 98.242, 106.586 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.121 - 1.660 |
R-factor | 0.1825 |
Rwork | 0.181 |
R-free | 0.20850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8pch |
RMSD bond length | 0.007 |
RMSD bond angle | 0.903 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.120 | 1.690 |
High resolution limit [Å] | 1.660 | 1.660 |
Rmerge | 0.087 | 1.658 |
Rmeas | 0.089 | 1.700 |
Rpim | 0.020 | 0.376 |
Number of reflections | 70589 | 3478 |
<I/σ(I)> | 20.4 | 2.2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.3 | 20.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 293 | 0.1 M sodium phosphate dibasic / citric acid, pH 4.2, 2.0 M ammonium sulfate |