6CYR
Crystal structure of the UBE2A variant Q93E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-29 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.45868 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.511, 52.419, 88.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.113 - 2.200 |
R-factor | 0.2061 |
Rwork | 0.204 |
R-free | 0.24920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cyo |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.21) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.113 | 45.110 | 2.270 |
High resolution limit [Å] | 2.200 | 9.070 | 2.200 |
Rmerge | 0.098 | 0.030 | 1.289 |
Rmeas | 0.107 | 0.033 | 1.466 |
Rpim | 0.044 | 0.014 | 0.683 |
Number of reflections | 9371 | 170 | 770 |
<I/σ(I)> | 11.3 | ||
Completeness [%] | 99.9 | 99.8 | 99.7 |
Redundancy | 5.8 | 5.1 | 4.4 |
CC(1/2) | 0.998 | 0.999 | 0.524 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 50 mM di-Sodium succinate pH 7.0 and 12-14% PEG 3350 |