6CVE
Crystal structure of Mycobacterium tuberculosis dethiobiotin Synthetase in complex with cytidine triphosphate and 7,8-diaminopelargonic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-07 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.7108 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.810, 103.841, 152.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.921 - 2.200 |
R-factor | 0.198 |
Rwork | 0.194 |
R-free | 0.27050 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.924 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.810 | 54.810 | 2.270 |
High resolution limit [Å] | 2.200 | 9.070 | 2.200 |
Rmerge | 0.567 | 0.061 | 3.980 |
Rmeas | 0.590 | 0.064 | 4.143 |
Rpim | 0.163 | 0.019 | 1.140 |
Number of reflections | 45167 | 751 | 3862 |
<I/σ(I)> | 5.7 | ||
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 13.1 | 11.4 | 13.2 |
CC(1/2) | 0.976 | 0.998 | 0.200 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289.15 | 0.7M NaCitrate, 0.1M Tris pH 7, 20% glycerol |