6CDQ
Crystal structure of the W202F variant of catalase-peroxidase from B. pseudomallei with INH bound.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-30 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 100.531, 114.896, 174.099 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 174.099 - 1.920 |
R-factor | 0.1676 |
Rwork | 0.166 |
R-free | 0.19890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 1MWV |
RMSD bond length | 0.016 |
RMSD bond angle | 1.399 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 174.099 | 48.293 | 2.020 |
High resolution limit [Å] | 1.920 | 6.070 | 1.920 |
Rmerge | 0.046 | 0.516 | |
Rmeas | 0.093 | 0.052 | 0.618 |
Rpim | 0.048 | 0.025 | 0.331 |
Total number of observations | 445240 | ||
Number of reflections | 136130 | 3965 | 21573 |
<I/σ(I)> | 9.4 | 10.6 | 1.5 |
Completeness [%] | 88.8 | 76.5 | 97.3 |
Redundancy | 3.3 | 3.6 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | MPD, 0.1 M sodium citrate |