6CA4
Crystal structure of humanized D. rerio TDP2 by 14 mutations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-03 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.034, 98.260, 134.740 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.391 - 1.623 |
R-factor | 0.1842 |
Rwork | 0.183 |
R-free | 0.20900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fpv |
RMSD bond length | 0.005 |
RMSD bond angle | 0.723 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 134.720 | 1.650 |
High resolution limit [Å] | 1.620 | 1.620 |
Rmerge | 0.074 | 1.864 |
Rmeas | 0.079 | 2.305 |
Rpim | 0.030 | 1.587 |
Number of reflections | 95228 | 8475 |
<I/σ(I)> | 15.5 | |
Completeness [%] | 99.0 | 83.1 |
Redundancy | 6.7 | 2.2 |
CC(1/2) | 0.999 | 0.424 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG3350, Sodium Malonate |