6C7I
Crystal structure of human phosphodiesterase 2A with 1-(2-chloro-5-methoxy-phenyl)-N-isobutyl-4-methyl-[1,2,4]triazolo[4,3-a]quinoxaline-8-carboxamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.1 |
| Synchrotron site | ALS |
| Beamline | 5.0.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-04-19 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97741 |
| Spacegroup name | P 1 |
| Unit cell lengths | 55.902, 72.682, 90.816 |
| Unit cell angles | 109.33, 91.13, 91.06 |
Refinement procedure
| Resolution | 47.395 - 1.713 |
| R-factor | 0.1719 |
| Rwork | 0.171 |
| R-free | 0.21430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.011 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.770 |
| High resolution limit [Å] | 1.710 | 3.680 | 1.710 |
| Rmerge | 0.043 | 0.027 | 0.376 |
| Rmeas | 0.061 | 0.038 | 0.532 |
| Rpim | 0.043 | 0.027 | 0.376 |
| Number of reflections | 140601 | 14280 | 13824 |
| <I/σ(I)> | 11.5 | ||
| Completeness [%] | 97.1 | 98.6 | 95.6 |
| Redundancy | 1.9 | 1.9 | 1.9 |
| CC(1/2) | 0.996 | 0.782 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.4 | 293 | 17-19% PEG3350, 0.2 M magnesium chloride, 0.1 M Tris, pH 8.4 |






