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6BMN

Structure of human DHHC20 palmitoyltransferase, space group P63

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-05
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.979100
Spacegroup nameP 63
Unit cell lengths99.541, 99.541, 158.386
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution86.205 - 2.250
R-factor0.258
Rwork0.257
R-free0.27790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.480
Data reduction softwareXDS
Data scaling softwareAimless (0.5.23)
Phasing softwarePHASER (2.7.15)
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]86.21086.2102.320
High resolution limit [Å]2.2509.0002.250
Rmerge0.0800.0274.776
Rmeas0.0890.0305.327
Rpim0.0390.0132.325
Total number of observations216086
Number of reflections418556593867
<I/σ(I)>12.3
Completeness [%]99.497.599.7
Redundancy5.24.95.2
CC(1/2)0.9990.9990.439
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE29350mM MES, pH5.8, 50mM KH2PO4, 27.7% PEG 300, 25mM DTT, 1.25% 2,5-Hexanediol after 3.5 months.

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