6BJY
VSV Nucleocapsid with Polyamide Bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-10 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 75.480, 165.480, 234.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.295 - 3.460 |
R-factor | 0.2681 |
Rwork | 0.266 |
R-free | 0.31070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gic |
RMSD bond length | 0.003 |
RMSD bond angle | 0.789 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 3.550 | ||
High resolution limit [Å] | 3.460 | 15.470 | 3.460 |
Rmerge | 0.150 | 0.100 | 0.666 |
Rmeas | 0.169 | 0.113 | 0.754 |
Total number of observations | 168334 | ||
Number of reflections | 38377 | 451 | 2821 |
<I/σ(I)> | 6.56 | 11.06 | 2.72 |
Completeness [%] | 97.6 | 84.9 | 99.1 |
Redundancy | 4.386 | 3.579 | 4.384 |
CC(1/2) | 0.991 | 0.984 | 0.716 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM Sodium Acetate pH 4.5, 0.01% beta-OG, and 6% PEG 3350, 250 mM Sodium Chloride |