6BHH
Crystal structure of SETDB1 with a modified H3 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-12-10 |
Detector | RIGAKU RAXIS |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.799, 71.804, 52.544 |
Unit cell angles | 90.00, 104.42, 90.00 |
Refinement procedure
Resolution | 36.610 - 1.850 |
R-factor | 0.1947 |
Rwork | 0.193 |
R-free | 0.23740 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | earlier version of model from PDB entry 6BHD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.389 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.610 | 36.610 | 1.860 |
High resolution limit [Å] | 1.820 | 9.100 | 1.820 |
Rmerge | 0.121 | 0.041 | 1.179 |
Rmeas | 0.143 | 0.049 | 1.391 |
Rpim | 0.074 | 0.026 | 0.729 |
Total number of observations | 88658 | 674 | 5076 |
Number of reflections | 24394 | ||
<I/σ(I)> | 7.9 | 27 | 1.1 |
Completeness [%] | 99.8 | 95.2 | 99.9 |
Redundancy | 3.6 | 3.4 | 3.6 |
CC(1/2) | 0.995 | 0.997 | 0.340 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 291 | 25% PEG3350, 0.2 M lithium sulfate, 0.1 M HEPES |