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6B0N

Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]293
Detector technologyPIXEL
Collection date2015-10-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03321
Spacegroup nameP 63
Unit cell lengths161.247, 161.247, 245.651
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.854 - 3.400
R-factor0.3358
Rwork0.335
R-free0.34640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tvp
RMSD bond length0.014
RMSD bond angle1.726
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: 000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.510
High resolution limit [Å]3.3903.390
Rpim0.1450.559
Number of reflections490634971
<I/σ(I)>6.91.3
Completeness [%]98.799.9
Redundancy6.46.1
CC(1/2)0.7150.202
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293.150.1M HEPES (pH 7.0), 15% (w/v) PEG4000, and cryo-protected with 25% glycerol

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