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6AYW

The structure of human CamKII with bound inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2012-12-06
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths54.149, 68.110, 84.825
Unit cell angles90.00, 94.56, 90.00
Refinement procedure
Resolution47.230 - 2.050
R-factor0.202
Rwork0.199
R-free0.26690
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.868
Phasing softwareEPMR
Refinement softwarePHENIX ((phenix.refine: 1.12_2829))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.050
Number of reflections36488
<I/σ(I)>18.7
Completeness [%]94.9
Redundancy2.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293CamKII S3-K301, in 20mM imidazole pH 8.5, 0.3M sodium chloride, 5mM TCEP, was concentrated to 36 mg/ml and flash frozen in liquid nitrogen for long term storage at -80 C in 10 microL aliquots. The protein was thawed and diluted down to 12 mg/mL in the same buffer just prior to crystallization experiments. Sitting drop vapor diffusion droplets were assembled with 250 nL of 12 mg/mL CamKII, 0.6 mM inhibitor and 250 nL of reservoir solution 24% peg 3350, 0.2 M ammonium tartrate, 0.1 M arginine. Flat crystal plates (typically 0.03 mm x 0.2 mm x 0.4 mm in size) grew in 4-7 days at 20 C. A crystal seed suspension was prepared with ten crushed crystals combined into 100 uL of reservoir solution and stored at -80 C. A thirty fold seed dilution was prepared in the same solution for addition to protein droplets in a 1 to 1 volume ratio to enhance crystallization of difficult to crystallize inhibitors.

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