6ASQ
Structure of Grp94 bound to methyl 2-[2-(2-benzylpyridin-3-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate, a pan-Hsp90 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 197.5 |
Detector technology | CCD |
Collection date | 2016-10-21 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.431, 84.717, 95.759 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.359 - 2.350 |
R-factor | 0.2001 |
Rwork | 0.197 |
R-free | 0.23670 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gfd |
RMSD bond length | 0.004 |
RMSD bond angle | 0.800 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.360 | 2.434 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.094 | 0.477 |
Number of reflections | 22770 | |
<I/σ(I)> | 24.75 | |
Completeness [%] | 100.0 | |
Redundancy | 14.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 289.2 | 1:1 30 mg/mL protein in 100 mM bicine, pH 7.8 against mother liquor (37% PEG400, 5% glycerol, 100 mM bicine, pH 7.8, 75 mM magnesium chloride). Crystals were harvested, and soaked for 48 hours in mother liquor containing 2.5 mM inhibitor. After soaking, glycerol was added to ~25% final concentration. |