6AO1
Crystal structure of a beta-lactamase from Burkholderia phymatum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-07 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.978560 |
Spacegroup name | P 1 |
Unit cell lengths | 69.300, 70.800, 82.580 |
Unit cell angles | 90.47, 98.62, 112.46 |
Refinement procedure
Resolution | 35.057 - 1.800 |
R-factor | 0.1641 |
Rwork | 0.164 |
R-free | 0.20060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5u8o |
RMSD bond length | 0.006 |
RMSD bond angle | 0.814 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.057 | 35.057 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.043 | 0.029 | 0.353 |
Rmeas | 0.053 | 0.036 | 0.441 |
Total number of observations | 375743 | ||
Number of reflections | 128398 | 1401 | 9438 |
<I/σ(I)> | 14.85 | 31.69 | 2.72 |
Completeness [%] | 96.8 | 94 | 95.7 |
Redundancy | 2.926 | 2.828 | 2.539 |
CC(1/2) | 0.998 | 0.997 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 18.6 mg/mL BuphA.15997.PS38000 against MCSG screen condition C7 (200 mM calcium chloride, 0.1 M Tris, pH 8.5, 20% PEG4000), cryoprotectant: 15% ethylene glycol, crystal tracking ID 290667h5, unique puck ID cho2-5 |