6A33
Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-07 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 51.430, 51.430, 336.570 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.397 - 2.100 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.24680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zuj |
RMSD bond length | 0.006 |
RMSD bond angle | 0.845 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.400 | 2.175 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.020 | 0.351 |
Rmeas | 0.028 | 0.497 |
Rpim | 0.020 | 0.351 |
Number of reflections | 16418 | 1576 |
<I/σ(I)> | 16.43 | |
Completeness [%] | 98.4 | 97.4 |
Redundancy | 1.99963 | 2 |
CC(1/2) | 1.000 | 0.827 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 277 | 0.1 M HEPES sodium, pH 7.5, 1M Sodium citrate tribasic dihydrate, and 10 mM TCEP |