6A1O
Crystal structures of disordered Z-type helices
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2006-10-22 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 65 |
Unit cell lengths | 31.112, 31.112, 43.044 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 16.816 - 2.490 |
R-factor | 0.2745 |
Rwork | 0.280 |
R-free | 0.29940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1d53 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.236 |
Data reduction software | XDS (GPLv2) |
Data scaling software | XDS (GPLv2) |
Phasing software | PHASER (2.6.0) |
Refinement software | PHENIX (1.10.1-2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 16.816 | 16.816 | 2.640 |
High resolution limit [Å] | 2.490 | 6.890 | 2.490 |
Rmerge | 0.084 | 0.056 | 0.171 |
Rmeas | 0.096 | 0.065 | 0.194 |
Total number of observations | 6944 | ||
Number of reflections | 1584 | 73 | 257 |
<I/σ(I)> | 9.95 | 13.12 | 6.24 |
Completeness [%] | 97.1 | 92.4 | 97 |
Redundancy | 4.384 | 4.37 | 4.397 |
CC(1/2) | 0.996 | 0.999 | 0.989 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1mM DNA, 50mM sodium cacodylate trihydrate buffer, 50mM CaCl2, 50% MPD. |