5ZZ9
Crystal structure of Homer2 EVH1/Drebrin PPXXF complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9776 |
Spacegroup name | P 1 |
Unit cell lengths | 45.337, 47.808, 50.415 |
Unit cell angles | 70.44, 83.56, 90.39 |
Refinement procedure
Resolution | 47.153 - 2.300 |
R-factor | 0.1934 |
Rwork | 0.192 |
R-free | 0.22810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ddv |
RMSD bond length | 0.004 |
RMSD bond angle | 0.782 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.064 | 0.035 | 0.474 |
Rmeas | 0.076 | 0.041 | 0.557 |
Rpim | 0.040 | 0.022 | 0.290 |
Number of reflections | 17008 | 870 | 797 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 96.6 | 98.9 | 94.5 |
Redundancy | 3.5 | 3.5 | 3.6 |
CC(1/2) | 0.997 | 0.824 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 289 | 50mM Ammonium fluoride, 8% w/v Polyethylene glycol 3350 |