5ZVH
The crystal structure of NSun6 from Pyrococcus horikoshii with SFG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-07-13 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9777 |
Spacegroup name | P 1 |
Unit cell lengths | 52.471, 52.941, 84.185 |
Unit cell angles | 81.49, 81.38, 67.45 |
Refinement procedure
Resolution | 41.409 - 2.500 |
R-factor | 0.1846 |
Rwork | 0.182 |
R-free | 0.22950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wwq |
RMSD bond length | 0.005 |
RMSD bond angle | 0.925 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.112 | 0.056 | 0.327 |
Rmeas | 0.122 | 0.060 | 0.368 |
Rpim | 0.048 | 0.022 | 0.164 |
Number of reflections | 26394 | 1411 | 954 |
<I/σ(I)> | 5.8 | ||
Completeness [%] | 92.2 | 98.3 | 67.1 |
Redundancy | 6 | 7.1 | 4.4 |
CC(1/2) | 0.995 | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | magnesium acetate ,sodium cacodylate trihydrate , polyethylene glycol 8,000 |