5ZO1
Crystal structure of mouse nectin-like molecule 4 (mNecl-4) full ectodomain (Ig1-Ig3), 2.2A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-01 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 109.497, 109.497, 182.441 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.295 - 2.201 |
R-factor | 0.2007 |
Rwork | 0.200 |
R-free | 0.21990 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.783 |
Data reduction software | XDS |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.295 | 2.330 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.144 | 0.943 |
Number of reflections | 28426 | 8531 |
<I/σ(I)> | 12.15 | 2.02 |
Completeness [%] | 99.7 | 98.1 |
Redundancy | 6.93 | 6.79 |
CC(1/2) | 0.996 | 0.678 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.04M Potassium dihydrogen phosphate, 10% PEG 8000, 25% (v/v) Glycerol |