Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZM2

Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AndA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-1A
Synchrotron sitePhoton Factory
BeamlineBL-1A
Temperature [K]95
Detector technologyPIXEL
Collection date2017-04-29
DetectorDECTRIS EIGER X 4M
Wavelength(s)1.1
Spacegroup nameP 1
Unit cell lengths61.954, 74.887, 87.450
Unit cell angles103.95, 108.22, 90.07
Refinement procedure
Resolution47.078 - 2.500
R-factor0.2004
Rwork0.198
R-free0.25300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ybm
RMSD bond length0.008
RMSD bond angle1.002
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.5502.550
High resolution limit [Å]2.5002.500
Rmerge0.1490.511
Number of reflections482984442
<I/σ(I)>6.6
Completeness [%]96.7
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29330% (w/v) PEG 3350, 200mM sodium tartrate, 20% DMF

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon