5ZJG
Gamma-glutamyltranspeptidase from Pseudomonas nitroreducens complexed with Gly-Gly
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-22 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.96401 |
Spacegroup name | P 1 |
Unit cell lengths | 43.537, 53.942, 107.260 |
Unit cell angles | 91.45, 100.19, 108.08 |
Refinement procedure
Resolution | 20.067 - 1.702 |
R-factor | 0.1555 |
Rwork | 0.155 |
R-free | 0.18920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dg5 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.924 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.600 |
High resolution limit [Å] | 1.570 | 1.570 |
Rmerge | 0.052 | 0.520 |
Rmeas | 0.055 | 0.567 |
Rpim | 0.020 | 0.221 |
Number of reflections | 121960 | 5713 |
<I/σ(I)> | 26.3 | |
Completeness [%] | 96.6 | 90.6 |
Redundancy | 7.5 | 6 |
CC(1/2) | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 16% (w/v) PEG 8000, 15% (w/v) PEG 400, 0.1M HEPES (pH 7.0), 50mM glycylglycine |