5ZJ9
human D-amino acid oxidase complexed with 5-chlorothiophene-3-carboxylic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-27 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 150.140, 182.730, 51.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.150 - 2.600 |
R-factor | 0.2206 |
Rwork | 0.219 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2du8 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.12) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.150 | 2.700 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.230 | 1.348 |
Rpim | 0.126 | 0.741 |
Number of reflections | 44351 | 4577 |
<I/σ(I)> | 9.5 | |
Completeness [%] | 100.0 | |
Redundancy | 8 | |
CC(1/2) | 0.993 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 15%(w/v) PEG 4000, 0.2M ammonium acetate, 0.1M Na citrate at pH 8.0, 10%(v/v) glycerol. |