5ZHG
Human group C rotavirus VP8*s recognize type A histo-blood group antigens as ligands
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | Xenocs GeniX 3D Cu HF |
Temperature [K] | 113 |
Detector technology | IMAGE PLATE |
Collection date | 2017-08-31 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54178 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.065, 40.070, 124.014 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.129 - 1.799 |
R-factor | 0.181 |
Rwork | 0.180 |
R-free | 0.20400 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.697 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.799 | 1.800 |
Rmerge | 0.099 | 0.565 |
Number of reflections | 18290 | |
<I/σ(I)> | 21.019 | |
Completeness [%] | 99.4 | |
Redundancy | 10.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.5 | 291 | 0.1 M Sodium chloride, 0.1 M BIS-TRIS pH 6.5, 1.5 M Ammonium sulfate |