Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZHG

Human group C rotavirus VP8*s recognize type A histo-blood group antigens as ligands

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsXenocs GeniX 3D Cu HF
Temperature [K]113
Detector technologyIMAGE PLATE
Collection date2017-08-31
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54178
Spacegroup nameP 21 21 21
Unit cell lengths38.065, 40.070, 124.014
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.129 - 1.799
R-factor0.181
Rwork0.180
R-free0.20400
RMSD bond length0.004
RMSD bond angle0.697
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.860
High resolution limit [Å]1.7991.800
Rmerge0.0990.565
Number of reflections18290
<I/σ(I)>21.019
Completeness [%]99.4
Redundancy10.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION6.52910.1 M Sodium chloride, 0.1 M BIS-TRIS pH 6.5, 1.5 M Ammonium sulfate

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon