5ZH9
Crystal Structures of Mutant Endo-beta-1,4-xylanase II (Y88F)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2017-12-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.331, 59.327, 70.056 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.782 - 1.150 |
R-factor | 0.1376 |
Rwork | 0.137 |
R-free | 0.14830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dfc |
RMSD bond length | 0.009 |
RMSD bond angle | 1.113 |
Data reduction software | XDS |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.782 | 1.191 |
High resolution limit [Å] | 1.150 | 1.150 |
Rmerge | 0.032 | 0.111 |
Number of reflections | 70926 | 6199 |
<I/σ(I)> | 19.45 | 6.35 |
Completeness [%] | 98.2 | 87.23 |
Redundancy | 5.7 | 5.8 |
CC(1/2) | 0.994 | 0.951 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6 | 291 | 20% PEG 8000, 0.2M NaI, 0.1M MES |