5ZE4
The structure of holo- structure of DHAD complex with [2Fe-2S] cluster
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-17 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.97774 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 135.467, 135.467, 65.978 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.110 |
R-factor | 0.17479 |
Rwork | 0.173 |
R-free | 0.21519 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j83 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.191 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.150 |
High resolution limit [Å] | 2.110 | 2.110 |
Rmerge | 0.189 | 1.240 |
Number of reflections | 36139 | |
<I/σ(I)> | 2 | |
Completeness [%] | 100.0 | |
Redundancy | 25.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 289 | 0.1 M sodium acetate pH 5.0, 1.5 M ammonium sulfate |