Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZDA

Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL13C1
Synchrotron siteNSRRC
BeamlineBL13C1
Temperature [K]100
Detector technologyCCD
Collection date2012-11-10
DetectorADSC QUANTUM 315r
Wavelength(s)0.97622
Spacegroup nameP 21 21 21
Unit cell lengths45.096, 71.073, 72.257
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.209 - 1.548
R-factor0.1708
Rwork0.170
R-free0.18990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3sih
RMSD bond length0.006
RMSD bond angle0.813
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.12_2829))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.2101.610
High resolution limit [Å]1.5481.550
Rmerge0.0570.487
Number of reflections33721
<I/σ(I)>19.534.391
Completeness [%]97.7100
Redundancy7.88.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52830.2M Li2SO4, 0.1 M Bis-Tris pH 6.5, 25% PEG 3350

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon