Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Z9F

Bacterial GyrB ATPase domain in complex with a chemical fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2017-05-02
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths61.587, 68.097, 102.124
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution56.660 - 1.760
R-factor0.20005
Rwork0.199
R-free0.22414
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4duh
RMSD bond length0.008
RMSD bond angle1.255
Data reduction softwareHKL-2000
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.6601.820
High resolution limit [Å]1.7601.760
Rmerge0.0600.194
Number of reflections395644239
<I/σ(I)>5214
Completeness [%]91.5100
Redundancy5.55.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2810.1M Tris-HCl pH 7.5, 2.20M (NH4)2HPO4, 10mM 2-aminobenzimidazole

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon