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5Z9E

Bacterial GyrB ATPase domain in complex with a chemical fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2017-07-08
DetectorADSC QUANTUM 315r
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths61.379, 68.558, 102.701
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.020 - 1.800
R-factor0.19568
Rwork0.194
R-free0.22222
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4duh
RMSD bond length0.009
RMSD bond angle1.307
Data reduction softwareHKL-2000
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]57.0201.860
High resolution limit [Å]1.8001.800
Rmerge0.0630.374
Number of reflections399683961
<I/σ(I)>40.45.4
Completeness [%]97.999.3
Redundancy4.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2850.1M Tris-HCl pH 7.5, 2.20M (NH4)2HPO4, 10mM 2-aminobenzimidazole

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PDB entries from 2024-07-03

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