5Z88
Crystal structure of H5 hemagglutinin G228S mutant with 3SLN from A/chicken/Taiwan/0502/2012
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1 |
Spacegroup name | H 3 2 |
Unit cell lengths | 110.227, 110.227, 314.193 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.121 - 3.000 |
R-factor | 0.2174 |
Rwork | 0.214 |
R-free | 0.29270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yt9 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.194 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.110 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.080 | 0.506 |
Rmeas | 0.094 | 0.605 |
Rpim | 0.049 | 0.324 |
Number of reflections | 13555 | |
<I/σ(I)> | 13.3 | |
Completeness [%] | 98.6 | |
Redundancy | 3.5 | 3.3 |
CC(1/2) | 0.966 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.1M Tris, 0.2M MgCl, 16%PEG8000 |