5Z5C
Crystal structure of hydrogen sulfide-producing enzyme (Fn1055) from Fusobacterium nucleatum: lysine-dimethylated form
Replaces: 5B54Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2011-06-20 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 57.760, 136.160, 171.680 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.930 - 2.070 |
R-factor | 0.18839 |
Rwork | 0.186 |
R-free | 0.24177 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.597 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.660 | 2.120 |
High resolution limit [Å] | 2.070 | 2.070 |
Rmerge | 0.051 | 0.245 |
Number of reflections | 83053 | |
<I/σ(I)> | 22.3 | 7.2 |
Completeness [%] | 99.6 | 98.4 |
Redundancy | 7 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 24% (W/V) PEG 3350, 0.1M HEPES PH 7.5, 0.2M MAGNESIUM CHLORIDE HEXAHYDRATE |