5Z0X
X-ray Crystal Structure of Pseudoazurin Met16Tyr Variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-11-24 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.540, 59.030, 54.000 |
Unit cell angles | 90.00, 105.56, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.460 |
R-factor | 0.1481 |
Rwork | 0.146 |
R-free | 0.19060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yl4 |
RMSD bond length | 0.020 |
RMSD bond angle | 2.122 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 52.021 | 28.287 | 1.540 |
High resolution limit [Å] | 1.460 | 4.620 | 1.460 |
Rmerge | 0.033 | 0.357 | |
Rmeas | 0.081 | 0.039 | 0.425 |
Rpim | 0.043 | 0.021 | 0.227 |
Total number of observations | 95447 | ||
Number of reflections | 29007 | 1049 | 4059 |
<I/σ(I)> | 9.3 | 19.3 | 2 |
Completeness [%] | 80.8 | 88.6 | 77.6 |
Redundancy | 3.3 | 3.1 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1M Tris-HCl, 34% PEG4000, 45mg/mL Protein |