5YVP
Crystal structure of an apo form cyclase Filc1 from Fischerella sp. TAU
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-04 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 86.758, 255.893, 34.912 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.242 - 2.051 |
R-factor | 0.214 |
Rwork | 0.212 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yvk |
RMSD bond length | 0.007 |
RMSD bond angle | 1.109 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.120 |
High resolution limit [Å] | 2.050 | 4.410 | 2.050 |
Rmerge | 0.073 | 0.052 | 0.400 |
Rmeas | 0.082 | 0.059 | 0.449 |
Rpim | 0.038 | 0.028 | 0.201 |
Number of reflections | 49655 | 5160 | 4856 |
<I/σ(I)> | 15.6 | ||
Completeness [%] | 99.1 | 96.3 | 99.9 |
Redundancy | 4.9 | 4.9 | 4.9 |
CC(1/2) | 0.994 | 0.956 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295 | 1.0M sodium citrate, 0.1M Imidazole pH 8.0 |