5YV3
DNA polymerase IV - DNA ternary complex 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-18 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.95372 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.249, 57.038, 109.950 |
Unit cell angles | 90.00, 94.55, 90.00 |
Refinement procedure
Resolution | 54.802 - 2.030 |
R-factor | 0.2049 |
Rwork | 0.203 |
R-free | 0.24850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ir1 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.761 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 109.600 | 2.240 |
High resolution limit [Å] | 2.030 | 2.120 |
Rmerge | 0.075 | 0.610 |
Number of reflections | 69290 | 8251 |
<I/σ(I)> | 12.3 | 2.4 |
Completeness [%] | 98.3 | 93.9 |
Redundancy | 4.8 | |
CC(1/2) | 0.997 | 0.807 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 298 | 15% MPD , pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K |