5YU5
Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-27 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.953720 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.412, 76.264, 400.703 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 200.000 - 2.270 |
R-factor | 0.20348 |
Rwork | 0.202 |
R-free | 0.23616 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 1.203 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | autoSHARP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 200.000 | 2.536 |
High resolution limit [Å] | 2.270 | 2.273 |
Rmerge | 0.046 | 0.473 |
Rmeas | 0.051 | 0.533 |
Rpim | 0.021 | 0.236 |
Number of reflections | 39269 | 1964 |
<I/σ(I)> | 18.1 | 2.7 |
Completeness [%] | 87.1 | 48.5 |
Redundancy | 5.9 | 4.5 |
CC(1/2) | 0.999 | 0.930 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M MES pH 6.5, 30% w/v PEG 400 |