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5YTX

Crystal structure of YB1 cold-shock domain in complex with UCAACU

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyCCD
Collection date2014-12-21
DetectorADSC QUANTUM 315
Wavelength(s)0.97915
Spacegroup nameP 62
Unit cell lengths66.512, 66.512, 33.633
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution28.801 - 1.551
R-factor0.2041
Rwork0.200
R-free0.24040
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3pf5
RMSD bond length0.006
RMSD bond angle0.919
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.610
High resolution limit [Å]1.5501.550
Number of reflections12349
<I/σ(I)>35.4
Completeness [%]98.9
Redundancy6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29030 % (v/v) 2-methyl-2,4-pentanediol, 0.1 M sodium acetate, pH 4.5, 25 % (w/v) PEG 1500

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