5YSX
Structure of P domain of GII.2 Noroviruses
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 113 |
Detector technology | CCD |
Collection date | 2017-07-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97915 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 96.534, 96.534, 64.319 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.361 - 1.202 |
R-factor | 0.1547 |
Rwork | 0.154 |
R-free | 0.16710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rpb |
RMSD bond length | 0.009 |
RMSD bond angle | 1.079 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.240 |
High resolution limit [Å] | 1.200 | 1.200 |
Number of reflections | 99924 | |
<I/σ(I)> | 29.5 | |
Completeness [%] | 99.7 | |
Redundancy | 12.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 4.6 | 291 | 0.1 M Sodium Acetate trihydrate pH 4.6, 8% w/v Polyethylene Glycol 4000 |