5YPV
Crystal structure of FabD from Acinetobacter baumannii
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-07-02 |
| Detector | ADSC QUANTUM 270 |
| Wavelength(s) | 0.979 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 67.459, 67.459, 110.296 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 29.211 - 1.670 |
| R-factor | 0.2183 |
| Rwork | 0.216 |
| R-free | 0.25750 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.083 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
| High resolution limit [Å] | 1.670 | 3.600 | 1.670 |
| Rmerge | 0.062 | 0.051 | 0.572 |
| Rmeas | 0.064 | 0.053 | 0.605 |
| Rpim | 0.017 | 0.013 | 0.194 |
| Total number of observations | 391209 | ||
| Number of reflections | 34750 | 3670 | 3436 |
| <I/σ(I)> | 19.8 | ||
| Completeness [%] | 99.9 | 99.4 | 100 |
| Redundancy | 11.3 | 16.7 | 9.1 |
| CC(1/2) | 0.999 | 0.953 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 8.5 | 293 | 1.4M ammonium tartrate dibasic, 0.1M Tris pH 8.5 |






