5YNJ
Crystal structure of MERS-CoV nsp16/nsp10 complex bound to m7GpppG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-03 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.9778 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 67.041, 70.516, 118.921 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.457 - 2.043 |
R-factor | 0.1962 |
Rwork | 0.195 |
R-free | 0.22130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r24 |
RMSD bond length | 0.003 |
RMSD bond angle | 1.176 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.600 | |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.067 | |
Rmeas | 0.070 | |
Rpim | 0.021 | |
Number of reflections | 72944 | 3576 |
<I/σ(I)> | 21.9 | 3.3 |
Completeness [%] | 99.8 | 99.1 |
Redundancy | 10.6 | 10 |
CC(1/2) | 0.999 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 290 | 10% PEG 5000 ME, 5% Tascimate |