5YNC
Crystal structure of Pullulanase from Klebsiella pneumoniae complex at 1 mM beta-cyclodextrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-06 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 88.925, 88.925, 299.527 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.683 - 2.320 |
R-factor | 0.1905 |
Rwork | 0.187 |
R-free | 0.25390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fgz |
RMSD bond length | 0.008 |
RMSD bond angle | 0.949 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.403 |
High resolution limit [Å] | 2.320 | 2.320 |
Rmerge | 0.087 | 0.485 |
Number of reflections | 53051 | 5167 |
<I/σ(I)> | 18.35 | 4.9 |
Completeness [%] | 99.7 | 98.7 |
Redundancy | 7 | 7.1 |
CC(1/2) | 0.998 | 0.934 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.2 M magnesium sulfate, 20% (w/v) PEG3350 |