5YIH
Crystal structure of tetrameric Nucleoside diphosphate kinase at 1.98 A resolution from Acinetobacter baumannii
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-07-05 |
| Detector | MARRESEARCH |
| Wavelength(s) | 0.9660 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 145.880, 70.470, 68.850 |
| Unit cell angles | 90.00, 109.40, 90.00 |
Refinement procedure
| Resolution | 68.800 - 1.980 |
| R-factor | 0.20471 |
| Rwork | 0.202 |
| R-free | 0.25571 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4s0m |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.712 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 68.800 | 2.009 |
| High resolution limit [Å] | 1.980 | 1.980 |
| Number of reflections | 45707 | 2261 |
| <I/σ(I)> | 8.7 | 2.2 |
| Completeness [%] | 98.7 | |
| Redundancy | 3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | HEPES: 7.5, PEG3350, 0.1MgCl2 |
