5YGH
Crystal Structure of the Capsid Protein from Zika Virus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-09-27 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.7293 |
| Spacegroup name | P 63 |
| Unit cell lengths | 69.417, 69.417, 58.070 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 29.792 - 1.884 |
| R-factor | 0.2073 |
| Rwork | 0.206 |
| R-free | 0.22970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1sfk |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.841 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.970 |
| High resolution limit [Å] | 1.880 | 1.900 |
| Rmerge | 0.098 | 0.743 |
| Rpim | 0.031 | 0.193 |
| Number of reflections | 13611 | |
| <I/σ(I)> | 21.137 | 6.401 |
| Completeness [%] | 99.2 | 100 |
| Redundancy | 16 | 16.7 |
| CC(1/2) | 0.994 | 0.975 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.01M Iron (III) chloride hexahydrate, 0.1M Sodium citrate pH5.6, 10% v/v Jeffamine M-600 |






