5YF8
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A-E472A mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 115.784, 115.784, 393.892 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.906 - 3.396 |
R-factor | 0.2321 |
Rwork | 0.230 |
R-free | 0.27120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cjq |
RMSD bond length | 0.010 |
RMSD bond angle | 1.164 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.000 | 60.000 | 3.520 |
High resolution limit [Å] | 3.396 | 7.320 | 3.400 |
Rmerge | 0.128 | 0.030 | 0.523 |
Rmeas | 0.142 | 0.033 | 0.582 |
Rpim | 0.059 | 0.014 | 0.251 |
Number of reflections | 18873 | 1972 | 1850 |
<I/σ(I)> | 6.3 | ||
Completeness [%] | 98.8 | 94.8 | 99.5 |
Redundancy | 5.3 | 5.1 | 5.1 |
CC(1/2) | 0.999 | 0.960 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6 | 289 | SOKALAN CP42 |