Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YDV

Regulatory domain of HypT from Salmonella typhimurium complexed with HOCl (HOCl-bound form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2015-12-12
DetectorADSC QUANTUM 315
Wavelength(s)0.97950
Spacegroup nameP 41 21 2
Unit cell lengths63.293, 63.293, 101.438
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.480 - 1.752
R-factor0.2109
Rwork0.209
R-free0.25320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ydo
RMSD bond length0.005
RMSD bond angle0.774
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.780
High resolution limit [Å]1.7501.750
Rmerge0.0560.325
Rpim0.0120.112
Number of reflections210301032
<I/σ(I)>42.614.98
Completeness [%]98.199.4
Redundancy18.48.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52870.2M lithium sulfate, 0.1M sodium cacodylate (pH 6.5), and 30%(v/v) PEG 400

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon