5YDV
Regulatory domain of HypT from Salmonella typhimurium complexed with HOCl (HOCl-bound form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-12 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97950 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 63.293, 63.293, 101.438 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.480 - 1.752 |
R-factor | 0.2109 |
Rwork | 0.209 |
R-free | 0.25320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ydo |
RMSD bond length | 0.005 |
RMSD bond angle | 0.774 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.056 | 0.325 |
Rpim | 0.012 | 0.112 |
Number of reflections | 21030 | 1032 |
<I/σ(I)> | 42.61 | 4.98 |
Completeness [%] | 98.1 | 99.4 |
Redundancy | 18.4 | 8.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 287 | 0.2M lithium sulfate, 0.1M sodium cacodylate (pH 6.5), and 30%(v/v) PEG 400 |