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5YCB

Crystal structure of notothenia coriiceps adenylate kinase variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2017-07-29
DetectorADSC QUANTUM 270
Wavelength(s)0.97933
Spacegroup nameP 41 21 2
Unit cell lengths105.284, 105.284, 84.217
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.652 - 2.272
R-factor0.1694
Rwork0.167
R-free0.21610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5x6k
RMSD bond length0.008
RMSD bond angle1.180
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.350
High resolution limit [Å]2.2702.270
Rpim0.0210.146
Number of reflections224612192
<I/σ(I)>38.636.97
Completeness [%]100.0100
Redundancy23.220.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2770.26M Lithium sulfate, 45% PEG400, 0.1M Acetate pH4.0

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