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5YC3

Crystal structure of AL3 PHD finger bound to H3K4me2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2016-03-18
DetectorADSC QUANTUM 315r
Wavelength(s)0.9792
Spacegroup nameP 41 2 2
Unit cell lengths30.921, 30.921, 157.029
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.257 - 2.601
R-factor0.1983
Rwork0.191
R-free0.24050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fsa
RMSD bond length0.003
RMSD bond angle0.670
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.640
High resolution limit [Å]2.6007.0502.600
Rmerge0.1890.0550.902
Rmeas0.1970.0580.935
Rpim0.0530.0170.244
Number of reflections2763191122
<I/σ(I)>4.8
Completeness [%]100.0100100
Redundancy13.410.114.4
CC(1/2)0.9990.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72891.8 M Ammonium citrate tribasic, pH 7.0.

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