5YBM
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase PrhA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2016-11-03 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1 |
Spacegroup name | P 62 |
Unit cell lengths | 172.834, 172.834, 44.705 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.208 - 2.115 |
R-factor | 0.1894 |
Rwork | 0.188 |
R-free | 0.22910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5ybl |
RMSD bond length | 0.007 |
RMSD bond angle | 0.828 |
Data scaling software | Aimless |
Phasing software | PHENIX ((1.10.1_2155)) |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 2.200 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 44042 | |
<I/σ(I)> | 9.1 | |
Completeness [%] | 99.8 | |
Redundancy | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350, lithium citrate |