5Y9F
Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2014-09-16 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 116.265, 417.233, 134.942 |
Unit cell angles | 90.00, 111.02, 90.00 |
Refinement procedure
Resolution | 36.528 - 3.350 |
R-factor | 0.2316 |
Rwork | 0.230 |
R-free | 0.26120 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.649 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 50.000 |
High resolution limit [Å] | 3.350 |
Number of reflections | 161106 |
<I/σ(I)> | 8.5 |
Completeness [%] | 94.5 |
Redundancy | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 2% tacsimate, 0.1 M sodium citrate, pH 5.5, 17% (w/v) PEG 3350 |