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5Y8A

Periplasmic heme-binding protein BhuT in complex with two hemes (holo-2 form)

Replaces:  5GJ1
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
Collection date2012-12-11
DetectorRAYONIX MX-225
Wavelength(s)1.00
Spacegroup nameP 1 2 1
Unit cell lengths46.088, 45.553, 113.002
Unit cell angles90.00, 100.35, 90.00
Refinement procedure
Resolution23.724 - 2.001
R-factor0.2039
Rwork0.201
R-free0.26000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gj3
RMSD bond length0.009
RMSD bond angle1.245
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.030
High resolution limit [Å]2.0005.4302.000
Rmerge0.0800.0260.438
Rmeas0.0920.0300.503
Rpim0.0440.0150.243
Total number of observations129249
Number of reflections3128316631484
<I/σ(I)>8.4
Completeness [%]99.599.898.7
Redundancy4.14.13.9
CC(1/2)0.9980.822
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.22772% PEG 3350, 0.2 M calcium acetate, and 0.1 M MES pH 6.2

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