5Y5H
SF-ROX structure of cytochrome P450nor (NO-bound state) determined at SACLA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SACLA BEAMLINE BL3 |
Synchrotron site | SACLA |
Beamline | BL3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-22 |
Detector | RAYONIX MX225-HS |
Wavelength(s) | 1.2404 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.017, 75.570, 101.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.452 - 1.500 |
R-factor | 0.1703 |
Rwork | 0.169 |
R-free | 0.19560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cl6 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.924 |
Data reduction software | cctbx.xfel |
Data scaling software | cctbx.prime |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 65042 | |
<I/σ(I)> | 47 | 8.6 |
Completeness [%] | 94.7 | 65.8 |
Redundancy | 56.2 | 9.2 |
CC(1/2) | 0.929 | 0.602 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 38% PEG 10000, 0.1 M BIS-TRIS PROPANE 0.15 M Ammonium acetate |