Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Y4T

Crystal structure of Trx domain of Grx3 from Saccharomyces cerevisiae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2016-03-04
DetectorADSC QUANTUM 315r
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths77.329, 77.329, 37.113
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.580 - 1.400
R-factor0.19004
Rwork0.189
R-free0.21907
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3d6i
RMSD bond length0.030
RMSD bond angle2.409
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.440
High resolution limit [Å]1.4001.403
Rmerge0.046
Number of reflections22509
<I/σ(I)>402.8
Completeness [%]99.696.44
Redundancy6.96.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8289.150.1 M Tris-HCl, pH 8.0, 2 M Ammonium sulfate

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon