5Y3N
Structure of TRAP1 complexed with DN401
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9796 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 69.410, 69.410, 252.159 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.705 - 2.400 |
R-factor | 0.2105 |
Rwork | 0.208 |
R-free | 0.25730 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.782 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.070 | |
Rpim | 0.030 | |
Number of reflections | 25006 | |
<I/σ(I)> | 40 | |
Completeness [%] | 99.1 | |
Redundancy | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 8000, sodium cacodylate, calcium acetate |